
Boutique hotel vacation rentals in San Juan Islands
Find and book unique boutique hotels on Airbnb
Top-rated boutique hotels in San Juan Islands
Guests agree: these boutique hotel rentals are highly rated for location, cleanliness, and more.
Vacation rentals for every style
Get the amount of space that is right for you.
Popular amenities for San Juan Islands boutique hotels
Family-friendly boutique hotels

College Inn Hotel (Premium Queen w/ Private Bath)

Bay View Room in the Heart of Port Townsend!

College Inn - Premium 2 Queen Room with Private Bath

College Inn (Euro-Style Queen+Twin, Shared Bath)

Deluxe Suite with Terrace

College Inn Hotel (European-Style Room 2 Queen Beds)

Stunning Saltwater Views! Charming Boutique Stay!

Superior queen room #2
Boutique hotels with a patio

Lavender King Suite, kitchen, Hot tub

Waterfront Fireplace Room with King Bed

Cottage in Downtown Port Townsend! Water Views!

Deluxe Cottage in the Heart of Port Townsend!

BayView Room - King bed, water view, jetted tub.

Hideaway Fireplace Room with King Bed and Hot Tub

Charming Private Cottage in Downtown!
Other boutique hotel vacation rentals

Regal Royale room at Juniper Lane

Creekside Haven-Heirloom Suite *no cleaning fee*

•Walk to Everything• Wi-Fi •Island Hotel•

~Sunny Bay Views~Seaside Hotel Walk to Everything~

Superior King Suite with Beautiful Castle Views

~Sunset Views~ Vintage Luxury w Modern Amenities!

Green Tea room at Juniper Lane

Queen Suite with garden views
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- French Beach
- Queen Elizabeth Park
- Fourth of July Beach
- Point Grey Golf & Country Club
- Willows Beach
- Bear Mountain Golf Club
- Salt Creek Recreation Area
- VanDusen Botanical Garden
- Craigdarroch Castle
- White Rock Pier
- Birch Bay State Park
- Olympic Game Farm
- Deception Pass State Park
- Shaughnessy Golf & Country Club
- Olympic View Golf Club
- Goldstream Provincial Park
- Marine Drive Golf Club
- Kinsol Trestle
- Riverway Golf Course and Driving Range
- Central Park
- Peace Portal Golf Club
- Royal BC Museum
- Whatcom Falls Park
- Crescent Beach