
Boutique hotel vacation rentals in San Juan Islands
Find and book unique boutique hotels on Airbnb
Top-rated boutique hotels in San Juan Islands
Guests agree: these boutique hotel rentals are highly rated for location, cleanliness, and more.

Private guesthouse immersed in nature
Your private guesthouse awaits at ~ Inn at Saltwater Farm ~ a modern, Scandinavian-style, boutique inn situated on 162 wild and beautiful acres just outside the town of Friday Harbor. Escape to your separate and private guesthouse with breathtaking views, modern amenities, and miles of trails, gardens, and natural beauty to explore. Private deck & floor-to-ceiling windows with a cozy & intimate woodsy view. Wheelchair accessible. KING bedroom + QUEEN loft + DOUBLE sleeper sofa + bathroom.

College Inn (European-Style Queen - Shared Bath)
Our family-owned College Inn is an authentic European-style* hotel in the heart of Seattle's vibrant University District & on the campus of the University of Washington, surrounded by restaurants, shops, cafes, and pubs. Newly remodeled in 2019, our guests enjoy modern comforts while in a hotel that is on the National Register of Historic Places. *In the tradition of "European-style" hotels, we have a common lounge, shared kitchen & SHARED BATHROOMS for our European-style rooms.

Lavender King Suite, kitchen, Hot tub
King bed in its own room. Euro-lounger in Livingroom that makes into a double. Your own private bath has a giant tile rain shower, HOT TUB off back deck facing water. Full kitchen including microwave, 3/4 size refrigerator, stove and all pots, pans, dishes and utensils. The dining area is in the sun-room and looks out towards the bay. Electric fireplace and 50in TV!! Coffee and tea are provided. Other amenities include hairdryer, fine microfiber bathrobes, cable TV, VCR and DVD.

Hot Tub, Sauna, Luxury. Welcome to Lavender View!
Serenity and quality abound. We want your stay at Lavender View to be EXCEPTIONAL. We offer luxurious accommodation in a resort-like setting on 2.5 acres. We take care of the fine details so you can simply relax and enjoy. We use the Airbnb platform exclusively to handle all of our reservations. However, we encourage you to visit our own website (Lavenderview dot ca). The “Book Now” button will take you back to this Airbnb listing to make your reservation.

Historic Innkeepers Apartment at winery
Private apartment at beautiful 1908 Inn at winery close to Port Townsend. Quiet setting 5 minutes to town. Main room includes kitchenette, dining area and couch that converts to a bed, the bedroom has a queen size bed, plus a laundry room, bathroom with claw foot tub, private entry, and private porch. Beautiful 12 acre estate with winery tasting room on site. Pets must be be pre-approved and must be in care of owners at all times and leashed when outdoors.

Anchorage Inn - Room #7 - Crows Nest
This spacious suite claims the entire 3rd floor. It has a King bed for 2, living room w/gas fireplace and French doors opening onto a Juliet balcony, overlooking Penn Cove, Mt. Baker and the historic Coupeville. The private bath has an air jetted tub and shower. Find also a smart TV streaming, and fiber WiFi. Continental breakfast is available to all guests. Due to our rooms being individually unique, prices differ base on the room and seasonal prices.

View of historic downtown Port Townsend
Wake up to views of downtown Port Townsend in our seaport boutique hotel! This second-floor room offers maritime-themed decor, one queen bed, and a full private bath. French doors open up to the balcony with two deck chairs. New eco-friendly initiatives yearly. Located in the heart of Port Townsend's cultural and historic district, the Swan is adjacent to Point Hudson Marina and just steps away from educational programs at the Northwest Maritime Center.

Wayfarers Guest House. Private, driftwood bunks #3
Thank you for finding the Wayfarers Rest, providing comfortable and convenient lodging for active travelers since 1999. Room 3 is a private room that can sleep up to 3, all linens provided. The common areas you will share with other guests (fully equipped kitchen, dining, living room and bathrooms) Wayfarers Rest is located just 4 blocks from the ferry terminal and two blocks from main St., easy walking. Free Wi-Fi, parking & chicken eggs. Pet friendly

Lavender Cabin, Pvt Beach & View, Firepit (#4)
Cottage #4: Lavender Cottage • Views: Enjoy sunsets, seals, herons, and eagles soaring over the harbor. • Beach Access: Trail to private beach & kayak rentals right outside. • Amenities: Small kitchen, serene lavender surroundings, and a loveseat or bed for relaxation. • Location: Minutes from Lavender Farms, Game Farm, and 15 mins to town. • Panoramic Views: Relax and take in the beauty through large windows. •. This is a studio cabin

Superior queen room #8
The Craigmyle is a heritage building. Elegant, inviting, and completely unique – The Craigmyle redefines boutique hotel living in the heart of Victoria, BC. Tucked away in one of the city’s gorgeous residential neighborhoods, just two minutes from the historic Craigdarroch Castle, our hotel places the city’s top attractions at your doorstep, while maintaining a sense of calm and tranquility that sure to relax and inspire you.

#6 ✤Perfect Family Retreat- Olympic National Park✤
Our recently remodeled 2 bedroom suite is perfect for a getaway for two couples, or friends! Located in the heart Olympic National Park, each room features a comfy, queen-sized bed. The kitchenette includes a sink, mini-fridge, and microwave and makes for an ideal refreshment area. The full-sized and private bathroom can easily accommodate all guests. (Please note that there is no door between the two rooms.)

Angeles Motel - Small Room w Queen Bed
Hi, Welcome to Angeles Motel, We are not pet friendly and No Smoking motel, We have Free WIFI, cable TV, guests laundry room and parking lot on premises, Very close to National Park and ferry and 6 blocks away to downtown. We do not welcome the guests with bad reviews, We do not welcome the guests with no reviews, the Guests with bad reviews or with no reviews please try somewhere else, Thanks!
Popular amenities for San Juan Islands boutique hotels
Family-friendly boutique hotels

Charming Room in Historic Inn with Parking - Rm 4

Charming Studio in Renovated BnB - Rm2

College Inn (Euro-Style Queen+Twin, Shared Bath)

•Walk to Everything• Wi-Fi •Island Hotel•

Charming B&B Studio in Capitol Hill Room 1

Charming Room in Historic Inn with Parking - Rm 8

View of historic downtown Port Townsend

Charming Room in Historic BnB with Parking - Rm 7
Boutique hotels with a patio

Waterfront Fireplace Room with King Bed

Cottage in Downtown Port Townsend! Water Views!

Eagles nest

Deluxe Cottage in the Heart of Port Townsend!

BayView Room - King bed, water view, jetted tub.

Hideaway Fireplace Room with King Bed and Hot Tub

Charming Private Cottage in Downtown!
Other boutique hotel vacation rentals

Queen Guestroom , Fireplace

Creekside Haven-Heirloom Suite *no cleaning fee*

#4 ✺Delightful Inn Room Near Lake Crescent✺

~Sunny Bay Views~Seaside Hotel Walk to Everything~

#5 ❀ Charming Bedroom on Quiet Property Near ONP ❀

Superior queen room #2

#3 ✦Close to Hiking in ONP | Room w/ 2 Twin Beds✦

Queen Suite with garden views
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- Boutique hotel rentals San Juan County
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- French Beach
- Queen Elizabeth Park
- Bear Mountain Golf Club
- Point Grey Golf & Country Club
- Fourth of July Beach
- White Rock Pier
- Salt Creek Recreation Area
- VanDusen Botanical Garden
- Craigdarroch Castle
- Willows Beach
- Birch Bay State Park
- Deception Pass State Park
- Shaughnessy Golf & Country Club
- Kinsol Trestle
- Olympic Game Farm
- Central Park
- Olympic View Golf Club
- Marine Drive Golf Club
- North Beach
- Goldstream Provincial Park
- Riverway Golf Course and Driving Range
- Whatcom Falls Park
- Moran State Park
- Victoria Golf Club