
Boutique hotel vacation rentals in Shinjuku
Find and book unique boutique hotels on Airbnb
Top-rated boutique hotels in Shinjuku
Guests agree: these boutique hotel rentals are highly rated for location, cleanliness, and more.
Vacation rentals for every style
Get the amount of space that is right for you.
Popular amenities for Shinjuku boutique hotels
Family-friendly boutique hotels

2nd Floor Artistic Twin Room Inspired by Noh Dream

Shinjuku 10mins! Relaxing room max 4ppl!

Room 101, 3 mins walk from Asakusabashi Station, Asakusa, Akihabara, Ueno neighborhood, kitchen with cooking utensils, washing machine, direct access to Haneda and Narita Airport

2 Double Beds with Sofa bed, Non Smoking

Skytree Station 5 Airport Disney Direct Kitchen Washing Machine Wifi Elevator Amin Hotel

New hotel/Compact Twin/2 people

Hotel like 1 big house/Standard Twin②/3 people

Newly opened hotel-style t suite Subway 3 minutes
Boutique hotels with a patio

Shibuya direct access to Skytree station 5 min walk 3 suites 3 bathrooms Washing machine Elevator Airport direct access

4 bedrooms, 4 bathrooms, 4 washing machines, 4 kitchens, direct access to the airport, washing machine, elevator building, 5 minutes walk to Skytree station

3 sets of bathrooms MAX14 people Skytree station 5 minutes 3 suite airport direct access to kitchen washing machine elevator

5 min walk to Skytree Station, direct access to airport and Disney, kitchen, washing machine, wifi, elevator, Amin Hotel

Shibuya Direct 5 to Skytree Subway Hike 2 Suites 2 Bathroom Airport Direct Access to Kitchen Washing Machine Elevator

Direct access to the airport, 5 minutes walk to Skytree Station, 2 suites, 2 bathrooms, kitchen, washing machine, elevator, Amin Hotel

TheMillennialsShibuya/Smart Pod Girls Only/1 Guest

4 bedrooms, 4 bathrooms, 3 washing machines, 4 kitchens, direct access to the airport, elevator building, 5 minutes walk to Skytree station
Other boutique hotel vacation rentals

Superior Room | Shinjuku20m|Kagurazaka

New Open!2BR 1 + Bar Kitchen!Family Room for 4-5!Asakusa Temple view!Direct access to Haneda & Narita Airport!

Modern queen suite with private bathroom - rooftop

Executive Room 56㎡|2Q+2SofaBed|20 min Shinjuku

Spacious 3F Loft with Kitchen & Uniqueness Living

4 single beds in Tokyo/2 train stations : Studio A

The Barn Tokyo - < Double room >

New-build/family owned/large rooms/wifi/Queenbed
Quick stats about boutique hotel rentals in Shinjuku
Total rentals
30 properties
Nightly prices starting at
$69 CAD before taxes and fees
Total number of reviews
1.8K reviews
Wifi availability
30 properties include access to wifi
Popular amenities
Kitchen, Wifi, and Pool
Local attractions
Shinjuku Station, Shin-Okubo Station, and Lumine the Yoshimoto
Destinations to explore
- Rentals with a fireplace Shinjuku
- House rentals Shinjuku
- Rentals with a washer and dryer Shinjuku
- Villa rentals Shinjuku
- Smoking-friendly rentals Shinjuku
- Fitness-friendly rentals Shinjuku
- Rentals with a patio Shinjuku
- Aparthotel rentals Shinjuku
- Rentals with outdoor seating Shinjuku
- Rentals with a home theater Shinjuku
- Condo rentals Shinjuku
- Apartment rentals Shinjuku
- Hotel rentals Shinjuku
- Serviced apartment rentals Shinjuku
- Family-friendly rentals Shinjuku
- Pet-friendly rentals Shinjuku
- Rentals with a hot tub Shinjuku
- Boutique hotel rentals Shinjuku
- Boutique hotel rentals Tokyo Prefecture
- Boutique hotel rentals Japan
- Asakusa Sta.
- Senso-ji Temple
- Tokyo Skytree
- Akihabara Sta.
- Kinshicho Sta.
- Shibuya Station
- Ikebukuro Station
- Ueno Sta.
- Tokyo Disney Resort
- Nippori Sta.
- Tokyo Disneyland
- Tokyo Tower
- Tokyo Sta.
- Kamakura Yuigahama Beach
- Yoyogi Park
- Shimo-Kitazawa Sta.
- Koenji Station
- Tawaramachi Station
- Tokyo Dome
- Otsuka Station
- Kamata Sta.
- Shinagawa Station
- Shimbashi Station
- Oshiage Sta.
- Things to do Shinjuku
- Things to do Shinjuku
- Tours Shinjuku
- Sightseeing Shinjuku
- Art and culture Shinjuku
- Sports activities Shinjuku
- Entertainment Shinjuku
- Food and drink Shinjuku
- Things to do Tokyo Prefecture
- Sightseeing Tokyo Prefecture
- Tours Tokyo Prefecture
- Sports activities Tokyo Prefecture
- Wellness Tokyo Prefecture
- Entertainment Tokyo Prefecture
- Food and drink Tokyo Prefecture
- Art and culture Tokyo Prefecture
- Nature and outdoors Tokyo Prefecture
- Things to do Japan
- Wellness Japan
- Nature and outdoors Japan
- Entertainment Japan
- Tours Japan
- Food and drink Japan
- Sightseeing Japan
- Art and culture Japan
- Sports activities Japan